October 18th 2024
Top articles published this week include an article about hyperspectral imaging in human skin research, a peer-reviewed article about analyzing geological samples using atomic spectroscopy techniques, and an equipment roundup piece about the latest products in the industry.
Protein Identification in Complex Mixtures: A Comparison of Accurate-Mass Q-TOF and Ion-Trap LC–MS
March 1st 2008Because it is extremely rapid, biomarker discovery and identification using liquid chromatography–mass spectrometry (LC-MS), including both ion-trap and triple-quadrupole LC–MS, is well established. Fractionation of complex samples before LC–MS-MS analysis might be necessary to identify the proteins, greatly increasing the number of analyses required. In this case, there is ongoing debate regarding knowing whether the protein is identified correctly, knowing how much prior fractionation is needed to reduce complexity to the point where low-abundance proteins can be detected reliably, and balancing specificity with sensitivity.
LC–MS-MS Determination of Malachite Green and Leucomalachite Green in Fish Products
March 1st 2008Although not currently used in U.S. or European aquaculture, malachite green (MG) is still an effective and inexpensive fungicide that is used in other countries, particularly in Asia. During metabolism, MG reduces to leucomalachite green (LMG) (Figure 1), which has been shown to accumulate in fatty fish tissues. Trace levels of MG and LMG residues continue to be found in fish products. In a 2005 report, MG was found in 18 out of 27 live eel or eel products imported from China to Hong Kong local market and food outlets, resulting in a government recall and destruction of all remaining products (1).
ICP-MS Detection for HPLC Analyses of Pharmaceutical Products
February 1st 2008The implementation of ICP-MS as a detection system for reversed-phase HPLC was proven to be a useful technique for the investigation of pharmaceutical molecules containing the heteroatoms sulfur, phosphorus, bromine, and chlorine, as well as organometallic compounds containing a transition metal such as cobalt.
Extraction and Detection of Antibiotics in the Rhizosphere Metabolome
November 1st 2007Root diseases caused by soilborne plant pathogens are responsible for billions of dollars of losses annually in food, fiber, ornamental, and biofuel crops. The use of pesticides often is not an option to control plant diseases because of economic factors or potential adverse effects on the environment or human health. For this reason, many Americans are now buying pesticide-free organic foods. Organic agriculture has few options for controlling pests and thus must make full use of natural microbial biological control agents in soils that suppress diseases.
Mass Analysis from Kilodaltons to Megadaltons Using Macroion Mobility Spectrometry
November 1st 2007Mass spectrometry (MS) has advanced to analyze ever-larger biomolecules with the invention of soft ionization techniques like electrospray ionization (ESI). Although ESI has provided a method of generating ions of high mass, mass spectrometers generally suffer both lower sensitivity and lower resolution as the mass-to-charge ratio of an ion increases. To extend the mass range of ionized macromolecules beyond the limits of MS, macroion mobility spectrometry utilizes ion mobility sizing to characterize charge-reduced ESI-generated macroions from >5 kDa to beyond megadalton masses. One prominent application of macroion mobility spectrometry, highlighted here, is the high sensitivity analysis of intact proteins, antibodies, and conjugates in which molecular masses range from antibody light-chain fragments to high mass immunoglobulin multimers.
Challenges in Small-Molecule Quantitation by Mass Spectrometry
November 1st 2007Drug discovery scientists are continually striving to improve productivity and efficiency in their workflows. From early discovery to clinical development, existing workflow bottlenecks represent an opportunity to develop solutions to speed the process and improve productivity. The key requirements for quantitative analysis are precision, accuracy, and linear dynamic range. With any quantitative instrument, the hope is that it will be applicable to a vast range of coumpounds, ruggest, and fast. New mass spectrometry (MS) technologies are being developed that meet these criteria and permit high throughput while enabling its application to areas in which speed limitations previously curtailed its practicality. In particular, in the area of ADME profiling, new MS platforms are becoming available that increase the throughput by at least 25-fold, by combining the speed of matrix-assisted laser desorption ionization (MALDI) with the specificity of triple-quadrupole MS. This is bound to greatly accelerate the ADME..
Analysis of Drinking Water Using ICP-OES
October 1st 2007The multielement analysis of water is one of the major applications for inductively coupled plasma-optical emission spectroscopy (ICP-OES). This report describes the analysis of metals and trace elements in drinking water in terms of sensitivity, precision, and accuracy. Instrument parameters and line selection are described. Excellent recoveries were found for the standard reference material (SRM) NIST SRM 1640.
Clinical Applications of ICP-MS: Optimizing the Front End
October 1st 2007Two of the most significant areas of advancement in inductively coupled plasma-mass spectrometry (ICP-MS) with respect to clinical applications have been the evolution of the sample introduction system and the interface of liquid chromatography (LC). The complexity of the sample matrix creates challenges for a number of components involved with the introduction of ions into the mass spectrometer, including the nebulizer, spray chamber, torch, and interface cones. The development of LC-ICP-MS methods enables analysts to quantitate not only the total metal content but the form of the metal as well, a distinction that in many cases is crucial. Although the refinement of reaction and collision cell technology has been important for this application, much has been written elsewhere and it will not be addressed here.
Bottled Water: Popular, But Is It Safe?
October 1st 2007Bottled water has become increasingly popular over the past several years for convenience and safety. In some areas where publicly supplied tap water is contaminated or contains bacteria, this assumption is valid. However, in areas with clean tap water, the presence of bottled water can be controversial because it might be less clean than the local tap. This article discusses the analysis of inorganic contaminants in bottled water, including regulated contaminants and bromate. Detection limit considerations and speed of analysis also are discussed.
Elemental "Fingerprinting" for Quality Control and Forensic Applications
October 1st 2007One of the promises of array detector inductively coupled plasma (ICP) systems has been the ability to measure all elements in an unknown sample. Sometimes referred to as elemental fingerprinting, this capability can be extremely powerful for quality control (QC) and forensic applications. To take advantage of this capability, the ICP system employed must provide full wavelength coverage as well as the spectral data handling tools needed to do the "fingerprinting." This article will demonstrate some of the elemental fingerprinting capabilities of ICP.
ICP Source Spectrometry Techniques in Regulated Water Analysis
October 1st 2007The spectrometric techniques of inductively coupled plasma–optical emission spectrometry (ICP-OES) and inductively coupled plasma–mass spectrometry (ICP-MS) are compared for their applicability to regulatory water analyses, bearing in mind recent method approval changes. ICP-OES is found to be at its limit for confident detection of several elements for drinking water analysis, but is still suitable for many environmental water quality measurements. ICP-MS is the closest there is to a universally applicable technique for water analysis.
FT–MS to Provide Novel Insight into Complex Samples
July 1st 2007More than 20 years passed after the introduction of Fourier transform–ion cyclotron resonance mass spectrometry (FT-MS) before advancements in electronics and computer technology enabled the development of practical, high-performance instruments. Modern analytical FT-MS instruments rely on sophisticated electronic circuitry and powerful computer software to achieve the dramatic resolving power and mass accuracy typical for the instrumentation. Here, the power of modern hybrid FT-MS instrumentation is discussed by demonstrating the capability of this instrumentation for selected applications such as the analysis of crude oil, intact protein, and fragile noncovalent complex samples.
Electron-Capture Dissociation in a Radio-Frequency Linear Ion Trap
Here we describe a new compact device for electron-capture dissociation (ECD) analysis of large peptides and posttranslational modifications of proteins, which can be difficult to analyze via conventional dissociation techniques such as collision-induced dissociation (CID). The new compact device realizes ECD in a radio frequency (RF) linear ion trap equipped with a small permanent magnet, which is significantly different than the large and maintenance-intensive superconducting magnet required for conventional ECD in Fourier-transform ion cyclotron resonance mass spectrometers. In addition to its compactness and ease of operation, an additional merit of an RF linear ion trap ECD is that its reaction speed is fast, comparable to CID, enabling data acquisition on the liquid-chromatography (LC) time scale. We interfaced the linear-trap ECD device to a time-of-flight mass spectrometer to obtain ECD spectra of phosphorylated peptides injected into a liquid chromatograph, infused glycopeptides, and intact small..
Mass Spectrometry for Metabolomics: Addressing the Challenges
July 1st 2007Metabolomics is a developing analytical approach that is growing rapidly in importance as a tool to improve diagnosis and treatment of disease, as well as to speed up the drug development process. Unlike genomics or proteomics, which only reveal part of what might be happening in a cell, metabolomic profiling can give an instantaneous snapshot of the entire physiology of that cell. This article describes the challenges associated with metabolomics research and new tools developed to overcome them.
The Challenges of Changing Retention Times in GC–MS
July 1st 2007Reproducing analysis conditions is crucial to achieving consistent, accurate results in gas chromatography–mass spectrometry (GC–MS). Valid reproduction demands appropriate application of technique, solid method design, reliable and accurate equipment, and a dedicated team of well-practiced technicians and researchers. But even when all these conditions are met, users can be held back by the more subtle elements in GC–MS operations, such as cutting or changing a column, or setting up the same experiment on different equipment. Even getting the parameters of a test organized so that it can be reproduced elsewhere - in a laboratory across the hall, the country, or the world - can be daunting. Consistent GC–MS results depend upon retention-time reproducibility.